A Combined Car−Parrinello QM/MM Implementation for ab Initio Molecular Dynamics Simulations of Extended Systems: Application to Transition Metal Catalysis
Citations Over TimeTop 10% of 1997 papers
Abstract
We test a new implementation of the combined quantum mechanics and molecular mechanics (QM/MM) methodology applied within the Car−Parrinello framework to perform ab initio molecular dynamics simulations of extended systems. The novel method is applied to determine the free energy barrier of the chain termination process in a nickel diimine based ethylene polymerization catalyst of the type (ArNC(R)−C(R)NAr)Ni(II)−R‘+, where R = Me and Ar = 2,6-C6H3(i-Pr)2. In this combined QM/MM ab initio molecular dynamics simulation, the Ni diimine core was treated at the Becke88−Perdew86 DFT level while the large substituted aryl rings were treated by the AMBER molecular mechanics force field. A 39 000 time step slow growth simulation of the termination process at 300 K has been performed providing a free energy barrier of ΔF⧧ = 14.8 kcal/mol by thermodynamic integration. This is in excellent agreement with the experimental termination barrier of ΔG⧧ ≈ 16 kcal/mol. Without the bulky ligands, the analogous pure QM simulation provided a free energy barrier of ΔF⧧ = 9.8 kcal/mol.
Related Papers
- → Development and application of ab initio QM/MM methods for mechanistic simulation of reactions in solution and in enzymes(2008)90 cited
- → Fragmentation-Based QM/MM Simulations: Length Dependence of Chain Dynamics and Hydrogen Bonding of Polyethylene Oxide and Polyethylene in Aqueous Solutions(2008)34 cited
- → Enhancing QM/MM Molecular Dynamics Sampling in Explicit Environments via an Orthogonal-Space-Random-Walk-Based Strategy(2011)23 cited
- → Binding free energies for nicotine analogs inhibiting cytochrome P450 2A6 by a combined use of molecular dynamics simulations and QM/MM-PBSA calculations(2014)21 cited
- → Reply Ab initio vibrational raman spectra of small ring molecules: Examples that warrant reevaluation of a scaling theme(1989)7 cited