Simulating metagenomic stable isotope probing datasets with MetaSIPSim
BMC Bioinformatics2020Vol. 21(1), pp. 37–37
Citations Over TimeTop 20% of 2020 papers
Abstract
Metagenomic-SIP is a valuable method for recovering isotopically labeled genomes from complex communities. We show that metagenomic-SIP performance depends on optimization of experimental parameters. MetaSIPSim allows for simulation of metagenomic-SIP datasets which facilitates the optimization and development of metagenomic-SIP experiments and analytical approaches for dealing with these data.
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