Cole Trapnell
University of Washington(US)Brotman Baty Institute(US)Allen Institute(US)Seattle University(US)
Publications by Year
Research Areas
Single-cell and spatial transcriptomics, RNA Research and Splicing, Zebrafish Biomedical Research Applications, Genomics and Chromatin Dynamics, CRISPR and Genetic Engineering
Most-Cited Works
- → Ultrafast and memory-efficient alignment of short DNA sequences to the human genome(2009)22,764 cited
- → Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation(2010)16,337 cited
- → TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions(2013)13,584 cited
- → Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks(2012)12,811 cited
- → TopHat: discovering splice junctions with RNA-Seq(2009)12,092 cited
- → The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells(2014)7,571 cited