Adam J. Pratt
University of Pittsburgh(US)
Publications by Year
Research Areas
Protein Structure and Dynamics, Gene Regulatory Network Analysis, Bioinformatics and Genomic Networks, Advanced Chemical Physics Studies, Complex Network Analysis Techniques
Most-Cited Works
- → WESTPA: An Interoperable, Highly Scalable Software Package for Weighted Ensemble Simulation and Analysis(2015)186 cited
- → Efficient Atomistic Simulation of Pathways and Calculation of Rate Constants for a Protein–Peptide Binding Process: Application to the MDM2 Protein and an Intrinsically Disordered p53 Peptide(2016)120 cited
- → WESTPA 2.0: High-Performance Upgrades for Weighted Ensemble Simulations and Analysis of Longer-Timescale Applications(2022)98 cited
- → Estimating first‐passage time distributions from weighted ensemble simulations and non‐Markovian analyses(2015)29 cited
- → A Suite of Tutorials for the WESTPA 2.0 Rare-Events Sampling Software [Article v2.0](2023)14 cited
- → Extensive Evaluation of Weighted Ensemble Strategies for Calculating Rate Constants and Binding Affinities of Molecular Association/Dissociation Processes(2019)8 cited
- → WESTPA 2.0 Advances in Sampling, Storage, and Analysis of Weighted Ensemble Simulations(2018)