S. Tansu Bagdatli
Stanford University(US)
Publications by Year
Research Areas
Single-cell and spatial transcriptomics, Genomics and Chromatin Dynamics, Cancer Genomics and Diagnostics, RNA and protein synthesis mechanisms, Epigenetics and DNA Methylation
Most-Cited Works
- → ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis(2021)1,387 cited
- → Single-cell epigenomic analyses implicate candidate causal variants at inherited risk loci for Alzheimer’s and Parkinson’s diseases(2020)375 cited
- → ArchR: An integrative and scalable software package for single-cell chromatin accessibility analysis(2020)73 cited
- → Systematic benchmarking of single-cell ATAC-sequencing protocols(2023)46 cited
- → Author Correction: ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis(2021)45 cited
- → Single-cell chromatin accessibility reveals malignant regulatory programs in primary human cancers(2024)36 cited
- → Single-cell epigenomic identification of inherited risk loci in Alzheimer’s and Parkinson’s disease(2020)14 cited
- → CasKAS: direct profiling of genome-wide dCas9 and Cas9 specificity using ssDNA mapping(2023)12 cited
- → The chromatin landscape of the euryarchaeon Haloferax volcanii(2023)9 cited
- → Simultaneous Single-Cell Profiling of the Transcriptome and Accessible Chromatin Using SHARE-seq(2022)8 cited