Patrik Koskinen
University of Helsinki(FI)
Publications by Year
Research Areas
Genomics and Phylogenetic Studies, Bioinformatics and Genomic Networks, Machine Learning in Bioinformatics, Plant-Microbe Interactions and Immunity, Plant Pathogenic Bacteria Studies
Most-Cited Works
- → A large-scale evaluation of computational protein function prediction(2013)1,078 cited
- → An expanded evaluation of protein function prediction methods shows an improvement in accuracy(2016)445 cited
- → The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera(2014)239 cited
- → Cytokinin and Auxin Display Distinct but Interconnected Distribution and Signaling Profiles to Stimulate Cambial Activity(2016)232 cited
- → PANNZER: high-throughput functional annotation of uncharacterized proteins in an error-prone environment(2015)154 cited
- → Revised Phylogeny and Novel Horizontally Acquired Virulence Determinants of the Model Soft Rot Phytopathogen Pectobacterium wasabiae SCC3193(2012)110 cited
- → BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing(2018)73 cited
- → SNP Design from 454 Sequencing of Podosphaera plantaginis Transcriptome Reveals a Genetically Diverse Pathogen Metapopulation with High Levels of Mixed-Genotype Infection(2012)71 cited
- → Genome Sequence of Dickeya solani, a New soft Rot Pathogen of Potato, Suggests its Emergence May Be Related to a Novel Combination of Non-Ribosomal Peptide/Polyketide Synthetase Clusters(2013)40 cited
- → Complete genome sequence of Propionibacterium freudenreichii DSM 20271T(2015)38 cited