The effect of data diversity on the performance of deep learning models for predicting early gastric cancer under endoscopy

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Abstract

Aims To explore the effect of training set diversity on the performance of deep learning models for predicting early gastric cancer (EGC) under endoscopy. Methods Images of EGC and non-cancerous lesions under narrow-band imaging (ME-NBI) and magnifying blue laser imaging (ME-BLI) were retrospectively collected. Training set 1 was composed of 150 non-cancerous and 309 EGC ME-NBI images, training set 2 was composed of 1505 non-cancerous and 309 EGC ME-BLI images, and training set 3 was the combination of training set 1 and 2. Test set 1 was composed of 376 non-cancerous and 1052 EGC ME-NBI images, test set 2 consisted of 529 non-cancerous and 71 EGC ME-BLI images, and test set 3 was the combination of test set 1 and test set 2. Three deep learning models were constructed, which were respectively CNN 1, CNN 2, and CNN 3 (CNN 1, CNN 2 and CNN 3 were independently trained using training set 1, training set 2 and training set 3 respectively), and their performance on each test set was respectively evaluated. One hundred and thirty-eight ME-NBI videos and 17 ME-BLI videos were further collected to evaluate and compare the performance of each model in real-time. Results On the whole, the performance of CNN 3 was the best. The accuracy (Acc), sensitivity (Sn), specificity (Sp), and area under the curve (AUC) of test set 1 in CNN 3 were 87.89% (1255/1428), 90.96% (342/376), 86.79% (913/1052), and 94.60% respectively. The Acc, Sn, Sp, and AUC of test set 2 in CNN 3 were 95% (570/600), 97.92% (518/529), 73.24% (52/71), and 90.93% respectively. The Acc, Sn, Sp, and AUC of test set 3 in CNN 3 were 89.99% (1825/2028), 95.03% (860/905), 85.93% (965/1123), 94.89% respectively. The performance of CNN 3 was also the best in videos test set. The Acc, Sn, and Sp of videos test set in CNN 3 were 91.03% (142/156), 90.58% (125/138), and 94.44% (17/18) respectively. Conclusions The deep learning model with the most diverse training data has the best diagnostic effect.

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